Useful Links

• Journals and Literature Databases

Writing

• Webster
• Duden
• German-English Dictionary
• The Elements of Style

Traveling

• Deutsche Bahn
• Lufthansa
• Wetter
• Currency Converter
• VisumCentrale
• USA - Visa Waiver

Linux

• Linux
• Ubuntu
• VirtualBox

Software

• Orca Forum
• ORCA Input Library
• ORCA Tutorial
• Avogadro
• Molden
• Phenix
• Coot
• pDynamo
• pDynamoWiki
• NAMD
• OpenBabel
• MSketch

Some Databases/Servers

• NCBI: The National Center for Biotechnology Information
• EBI: The European Bioinformatics Institute
• DDBJ: DNA Data Bank of Japan
• KEGG: Kyoto Encyclopedia of Genes and Genomes
• Brenda
• NAR – Database Collection
• NAR – Webserver Collection
• Protein Data Bank
• WebCSD (Cambridge Structural Database)
• Crystallography Open Database
• Orientations of Proteins in Membranes
• Heme Protein Database
• eQuilibrator – thermodynamic analysis of biochemical systems
• AlphaFold – Protein Structure Prediction
• Phyre2 – Protein Structure Prediction
• BackPhyre – Protein Structure Prediction
• pKa values and BDE server – iBonD
• SignalP
• TermiNator-Terminal Editing (like N-terminal methionine excision)

Mailing Lists

• CCL: Computational Chemistry List

Python Related Science

• Python
• The Python Tutorial
• PyMOL
• Biopython
• PyRosetta
• PyQuante: Python Quantum Chemistry
• cclib – Interpreting the results of computational chemistry packages
• matplotlib
• NumPy
• SciPy
• Pdynamo
• GTKDynamo
• Computational Crystallography Toolbox
• NMRGlue
• IPython – User Interface
• BPython – UserInterface